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Automated Image Analysis Framework for the High-Throughput Determination of Grapevine Berry Sizes Using Conditional Random Fields

机译:用于高吞吐量测定的自动图像分析框架   使用条件随机场的Grapevine Berry大小

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摘要

The berry size is one of the most important fruit traits in grapevinebreeding. Non-invasive, image-based phenotyping promises a fast and precisemethod for the monitoring of the grapevine berry size. In the present study anautomated image analyzing framework was developed in order to estimate the sizeof grapevine berries from images in a high-throughput manner. The frameworkincludes (i) the detection of circular structures which are potentially berriesand (ii) the classification of these into the class 'berry' or 'non-berry' byutilizing a conditional random field. The approach used the concept of aone-class classification, since only the target class 'berry' is of interestand needs to be modeled. Moreover, the classification was carried out by usingan automated active learning approach, i.e no user interaction is requiredduring the classification process and in addition, the process adaptsautomatically to changing image conditions, e.g. illumination or berry color.The framework was tested on three datasets consisting in total of 139 images.The images were taken in an experimental vineyard at different stages ofgrapevine growth according to the BBCH scale. The mean berry size of a plantestimated by the framework correlates with the manually measured berry size by$0.88$.
机译:浆果大小是葡萄育种中最重要的水果性状之一。基于图像的非侵入性表型分析为监测葡萄浆果大小提供了一种快速而精确的方法。在本研究中,开发了一种自动化的图像分析框架,以便以高通量的方式从图像中估计葡萄浆果的大小。该框架包括(i)检测可能为浆果的圆形结构,以及(ii)通过使用条件随机字段将其分类为“浆果”或“非浆果”类。由于仅关注目标类“浆果”并且需要建模,因此该方法使用了“单一类”分类的概念。此外,通过使用自动主动学习方法进行分类,即在分类过程中不需要用户交互,此外,该过程可自动适应变化的图像条件,例如图像。在三个数据集中测试了该框架,总共139张图像。这些图像是根据BBCH规模在葡萄生长不同阶段的实验性葡萄园中拍摄的。框架估算的植物平均浆果大小与人工测量的浆果大小相关,为$ 0.88 $。

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